While I was setting up a CGI directory I was getting the following error

[Tue May 03 01:22:11.274857 2016] [negotiation:error] [pid 2625] (13)Permission denied: [client 84.91.XXX.XXX:49530] AH00686: cannot read directory for multi: /var/www/domain.com/, referer: http://domain.com/

This solved me the issue….

ScriptAlias /cgi-bin/ /var/www/domain.com/cgi-bin/
 <Directory /var/www/domain.com/>
   AllowOverride None
   Options +ExecCGI -MultiViews +SymLinksIfOwnerMatch
   Order allow,deny
   Allow from all
</Directory>