Okay!, here we go.
Download check_yum plugin from https://github.com/calestyo/check_yum/blob/master/check_yum to /usr/lib64/nagios/plugins/ on your CentOS nrpe server.
Add the command on your nagios.cfg
command[check_yum]=/usr/lib64/nagios/plugins/check_yum
Restart NRPE
/bin/systemctl restart nrpe.service
And on your nagios server on your host/s5.domain.com.cfg
define service { use generic-service host_name s5.domain.com service_description SYS: system updates check_command check_nrpe!check_yum!1 }
Restart Nagios
/bin/systemctl restart nagios.service